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枯草芽孢杆菌菌剂对烟草根际土壤细菌群落的影响

游偲1,张立猛2,计思贵2,高加明3,张成省1**,孔凡玉1   

  1. (1中国农业科学院烟草研究所/烟草行业烟草病虫害监测与综合治理重点实验室, 山东青岛 266101; 2云南省烟草公司玉溪市公司, 云南玉溪 653100; 3湖北省烟草公司, 武汉 430000)
  • 出版日期:2014-11-18 发布日期:2014-11-18

Impact of biocontrol agent Bacillus subtilis on bacterial communities in tobacco rhizospheric soil.

YOU Cai1, ZHANG Li-meng2, JI Si-gui2, GAO Jia-ming3, ZHANG Cheng-sheng1, KONG Fan-yu1   

  1. (1Tobacco Research Institute, Chinese Academy of Agricultural Sciences/Key Laboratory of Tobacco Pest Monitoring & Integrated Management, Qingdao 266101, Shandong, China; 2Yunnan Tobacco Company in Yuxi, Yuxi 653100, Yunnan, China;  3Hubei Tobacco Company, Wuhan 430000, China)
  • Online:2014-11-18 Published:2014-11-18

摘要:

通过构建16S rRNA克隆文库及采用核糖体DNA扩增片段酶切分析(ARDRA)的方法,研究施用生物防治剂枯草芽孢杆菌菌剂对烟草根际土壤细菌群落结构以及多样性的影响.采用文库库容值(C)、Shannon多样性指数(H)、Pielou 均匀度指数(E)和Margalef丰富度指数(R)对细菌多样性进行评价.系统发育分析表明: 对照及处理样品均检测到12个细菌类群:酸杆菌门(Acidobacteria)、变形菌门(α、β、δ、γ-Proteobacteria)、浮霉菌门(Planctomycetes)、厚壁菌门(Firmicutes)、硝化螺旋菌门(Nitrospirae)、芽单胞菌门(Gemmatimonadetes)、放线菌门(Actinobacteria)、绿弯菌门(Chloroflexi)和拟杆菌门(Bacteroidetes);但各细菌类群的结构组成及所占比例在不同样品间有较大差别.对照土壤中优势菌群为Acidobacteria(27.1%)和Proteobacteria(26.5%);处理土壤中则为Proteobacteria(38.0%)和Acidobacteria(29.6%);菌剂处理后土壤中,γ-Proteobacteria和αProteobacteria所占比例明显提高,而βProteobacteria、Planctomycetes和Firmicutes等菌群的数量则相对降低.多样性分析表明,土壤样品均具有丰富的细菌多样性,经枯草芽孢杆菌菌剂处理后,土壤细菌多样性指数和丰富度指数均提高.

 

Abstract: The impact of inoculation with the biocontrol agent Bacillus subtilis on bacterial communities and bacterial diversity in rhizospheric soil of Nicotiana tabacum was assessed by constructing a 16S rRNA gene clone library and conducting amplified ribosomal DNA restriction analysis (ARDRA). The bacterial diversity was evaluated by coverage value (C), Shannon index (H), Pielou evenness index (E) and Margalef richness index (R). Phylogenetic analysis revealed that the inoculation significantly affected the composition of bacterial communities in tobacco rhizospheric soil. A total of twelve bacterial groups including Acidobacteria, Proteobacteria (including α, β, δ, γ-Proteobacteria), Planctomycetes, Firmicutes, Nitrospirae, Gemmatimonadetes, Actinobacteria, Chloroflexi and Bacteroidetes were detected to be shared by inoculated soil and control soil. The community composition and proportions of different bacteria in the communities showed significant variations between the two samples. The dominant bacteria were Acidobacteria (27.1%) and Proteobacteria (26.5%) in control soil, while in the inoculated soil Proteobacteria (38.0%) and Acidobacteria (29.6%) were dominant. B. subtilis inoculation increased the numbers of γ-Proteobacteria and α-Proteobacteria but reduced the numbers of bacterial groups such as β-Proteobacteria, Planctomycetes, Firmicutes. Diversity analysis showed that bacterial diversity was rich for both soil samples, and soil bacterial Shannon index and Margalef richness index were promoted after inoculation.