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Analysis of ISSR genetic polymorphism for Tibetan yak.

YAO Hui1, ZHONG Jin-cheng1, JI Qiu-mei2, ZHANG Cheng-fu2, XIN Jin-wei2, CHEN Zhi-hua1**, CHAI Zhi-xin1   

  1. (1Key Laboratory of Animal Genetics and Breeding of State Ethnic Affairs Commission and Ministry of Education, Southwest University for Nationalities, Chengdu 610041, China; 2Institute of Animal Science and Veterinary, Tibetan Academy of Agricultural and Animal Husbandry Sciences, Lhasa 850000, China)
  • Online:2015-11-10 Published:2015-11-10

Abstract: In order to analyze the genetic diversity of Tibetan yaks, 10 pairs of primers were selected from ISSR primer library and used to analyze 17 groups (species), with a total number of 850 yaks, by PCR amplification. The obtained statistical data were also analyzed by Popgen 32 software. The results showed that 10 pairs of ISSR primers amplified a total of 134 bands including 132 polymorphic bands. The polymorphism ratio is 95% and the size of the amplified fragment ranges from 200 to 2000 bp. The average effective number of alleles of 17 yak groups is 1.498, the mean index of Nei’s genetic diversity is 0.294 and average Shannon diversity index is 0.449. Clustering results show that Tibetan yaks are roughly divided into three categories: The first group includes Cuona yak, Jiangda yak, Gongbujiangda yak, Kangbu yak, Baqing yak, Leiwuqi yak, Sangsang yak, Jiali yak, Sibu yak and Longzi yak; the second includes Dingqing yak, Nierong yak, Pali yak, Riduo yak, Sangri yak and Shenza yak; the third group only includes Zhongba yak. Cluster analysis results are basically consistent with the geographic distribution of yaks.

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