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Transcriptome analysis of inflorescences from four soybean cultivars.

ZHANG Chi1,2, GAO Zhen-rui1,2, DONG You-kui3, CUI Min-long1**   

  1. (1Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China; 2University of Chinese Academy of Sciences, Beijing 100049, China; 3Tieling Academy of Agricultural Sciences in Liaoning Province, Tieling 112616, Liaoning, China)
  • Online:2015-12-10 Published:2015-12-10

Abstract: To study the floral organ abscission, soybean (Glycine max) inflorescences from four cultivars were used for RNA extraction, RNAseq and transcriptome analysis. A total of 20 GB raw data and 14.87 GB clean data were obtained from RNAseq. The result showed that the transcriptome differences between multiple and relatively less soybean inflorescences mainly lied in substance metabolism, stress response (GLYMA02g03301, GLYMA02G03230, etc.), stimulation response and disease resistance. But genes directly related to abscission show no expression difference. This indicated the possible influences of these genes on soybean flowers and pods abscission. Our research systematically investigated the characteristics and variances of different soybean inflorescences and analyzed the effects of different expression genes on soybean flower abscission and shattering. These data enriched soybean transcriptome database.

Key words: fenpropathrin, Panonychus citri, avermectin, life-table parameters., sublethal effect