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Characteristics of soil ammonia-oxidation microbial communities in different subtropical forests, China.

LI Yong-chun1, LIU Bu-rong1,2, GUO Shuai1, WU Qi-feng3, QIN Hua1, WU Jia-sen1, XU Qiu-fang1   

  1. (1Zhejiang Provincial Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration, School of Environmental and Resources, Zhejiang Agriculture and Forestry University, Lin’an 311300, Zhejiang, China; 2Sheyang Commission of Agriculture, Sheyang 224300, Jiangsu, China; 3Lin’an Extending Station for Agricultural Technique, Lin’an 311300, Zhejiang, China)
  • Online:2014-01-18 Published:2014-01-18

Abstract: To investigate the effects of different forest stands in subtropical China on the communities of soil ammonia-oxidizing microorganisms, we characterized the abundance of ammoniaoxidizing archaea (AOA) and bacteria (AOB), and the community structure of AOA in soils under stands of broad-leaved (BF), Chinese fir (CF), Pinus massoniana (PF) and moso bamboo (MB) forests using real-time quantitative PCR and denaturing gradient gel electrophoresis (DGGE). The results showed that the AOA gene copy numbers (1.62×106-1.88×107 per gram of dry soil) were significantly higher than those of  AOB genes (2.41×105-4.36×105 per gram of dry soil). Significantly higher soil AOA abundance was detected in the MB than that in the CF (P<0.05), and the latter was significantly higher than that in the BF and PF soils (P<0.05). There were no significant differences in the soil AOB abundance among the four forest stands. As indicated by DGGE pattern, soil AOA species varied among the four forest stands. There was a difference in the soil AOA communities between the CF and MB stands. The AOA demonstrated a competitive advantage over the AOB in the soils under these major subtropical forests. Soil pH, concentrations of soil available potassium and organic carbon as well as the forest type were the main factors that influence the variation of AOA community structure and diversity.