
Chinese Journal of Applied Ecology ›› 2023, Vol. 34 ›› Issue (3): 639-646.doi: 10.13287/j.1001-9332.202303.005
Previous Articles Next Articles
LIU Yanji1,2, LIU Zikai1,2, JIN Shengsheng1,2, DENG Huiyu1,2, SHEN Jupei1,2*, HE Jizheng1,2
Received:2022-11-07
Accepted:2022-12-29
Published:2023-09-15
LIU Yanji, LIU Zikai, JIN Shengsheng, DENG Huiyu, SHEN Jupei, HE Jizheng. Response of gene abundance of ammonia-oxidizing microorganisms and denitrifying microorganisms to nitrogen and phosphorus addition in subtropical forest.[J]. Chinese Journal of Applied Ecology, 2023, 34(3): 639-646.
Add to citation manager EndNote|Ris|BibTeX
URL: https://www.cjae.net/EN/10.13287/j.1001-9332.202303.005
| [1] Kuypers MMM, Marchant HK, Kartal B. The microbial nitrogen-cycling network. Nature Reviews Microbiology, 2018, 16: 263-276 [2] Daims H, Lebedeva EV, Pjevac P, et al. Complete nitrification by Nitrospira bacteria. Nature, 2015, 528: 504-509 [3] He JZ, Shen JP, Zhang LM, et al. Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices. Environmental Microbiology, 2007, 9: 2364-2374 [4] Shi XZ, Hu HW, Wang JQ, et al. Niche separation of comammox Nitrospira and canonical ammonia oxidizers in an acidic subtropical forest soil under long-term nitrogen deposition. Soil Biology and Biochemistry, 2018, 126: 114-122 [5] 董兴水, 王智慧, 黄学茹, 等. 硝化作用研究的新发现: 单步硝化作用与全程氨氧化微生物. 应用生态学报, 2017, 28(1): 345-352 [6] Levy-Booth DJ, Prescott CE, Grayston SJ. Microbial functional genes involved in nitrogen fixation, nitrification and denitrification in forest ecosystems. Soil Biology and Biochemistry, 2014, 75: 11-25 [7] Gao WL, Yang H, Kou L, et al. Effects of nitrogen deposition and fertilization on N transformations in forest soils: A review. Journal of Soils and Sediments, 2015, 15: 863-879 [8] Gundersen P, Christiansen JR, Alberti G, et al. The res-ponse of methane and nitrous oxide fluxes to forest change in Europe. Biogeosciences, 2012, 9: 3999-4012 [9] Vitousek PM, Porder S, Houlton BZ, et al. Terrestrial phosphorus limitation: Mechanisms, implications, and nitrogen-phosphorus interactions. Ecological Applications, 2010, 20: 5-15 [10] Vitousek PM, Mooney HA, Lubchenco J, et al. Human domination of earth’s ecosystems. Science, 1997, 277: 494-499 [11] Wang RZ, Bicharanloo B, Hou E, et al. Phosphorus supply increases nitrogen transformation rates and retention in soil: A global meta-analysis. Earth’s Future, 2022, 10: e2021EF002479 [12] Tang YQ, Zhang XY, Li DD, et al. Impacts of nitrogen and phosphorus additions on the abundance and community structure of ammonia oxidizers and denitrifying bacteria in Chinese fir plantations. Soil Biology and Biochemistry, 2016, 103: 284-293 [13] Wang H, Liu SR, Zhang X, et al. Nitrogen addition reduces soil bacterial richness, while phosphorus addition alters community composition in an old-growth N-rich tropical forest in southern China. Soil Biology and Biochemistry, 2018, 127: 22-30 [14] 吴茜, 丁佳, 闫慧, 等. 模拟降水变化和土壤施氮对浙江古田山5个树种幼苗生长和生物量的影响. 植物生态学报, 2011, 35(3): 256-267 [15] 陈琳, 曾冀, 李华, 等. 全球降水格局变化下土壤氮循环研究进展. 生态学报, 2020, 40(20): 7543-7551 [16] Chen J, Xiao G, Kuzyakov Y, et al. Soil nitrogen transformation responses to seasonal precipitation changes are regulated by changes in functional microbial abundance in a subtropical forest. Biogeosciences, 2017, 14: 2513-2525 [17] 周宇峰. 开化: 水土保持结硕果生态文明谱新篇. 中国水土保持, 2017(6): 3-4 [18] 宛颂, 段春健, 樊剑波, 等. 旱地红壤反硝化功能基因丰度对长期施肥的响应. 应用生态学报, 2020, 31(11): 3729-3736 [19] Rotthauwe JH, Witzel KP, Liesack W. The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations. Applied and Environmental Microbiology, 1997, 63: 4704-4712 [20] Tourna M, Freitag TE, Nicol GW, et al. Growth, acti-vity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environmental Microbiology, 2008, 10: 1357-1364 [21] Jiang R, Wang JG, Zhu T, et al. Use of newly designed primers for quantification of complete ammonia-oxidizing (comammox) bacterial clades and strict nitrite oxidizers in the genus Nitrospira. Applied and Environmental Microbiology, 2020, 86: e01775-20 [22] Throbäck IN, Enwall K, Jarvis A, et al. Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE. FEMS Microbiology Ecology, 2004, 49: 401-417 [23] Michotey V, Mejean V, Bonin P. Comparison of methods for quantification of cytochrome cd 1-denitrifying bacteria in environmental marine samples. Applied and Environmental Microbiology, 2000, 66: 1564-1571 [24] Henry S, Bru D, Stres B, et al. Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils. Applied and Environmental Microbiology, 2006, 72: 5181-5189 [25] Du E, Fenn ME, De Vries WD, et al. Atmospheric nitrogen deposition to global forests: Status, impacts and management options. Environmental Pollution, 2019, 250: 1044-1048 [26] Wang Y, Ji HF, Wang R, et al. Responses of nitrification and denitrification to nitrogen and phosphorus fertilization: Does the intrinsic soil fertility matter? Plant and Soil, 2019, 440: 443-456 [27] Guo JH, Liu XJ, Zhang Y, et al. Significant acidification in major Chinese croplands. Science, 2010, 327: 1008-1010 [28] 徐仁扣. 土壤酸化及其调控研究进展. 土壤 , 2015, 47(2): 238-244 [29] Vitousek PM, Porder S, Houlton BZ, et al. Terrestrial phosphorus limitation: Mechanisms, implications, and nitrogen-phosphorus interactions. Ecological Applications, 2010, 20: 5-15 [30] 王全成, 郑勇, 宋鸽, 等. 亚热带次级森林演替过程中模拟氮磷沉降对土壤微生物生物量及土壤养分的影响. 生态学报, 2021, 41(15): 6245-6256 [31] Zhang JF, Zhou JG, Lambers H, et al. Nitrogen and phosphorus addition exerted different influences on litter and soil carbon release in a tropical forest. Science of the Total Environment, 2022, 832: 155049 [32] Gurmesa GA, Wang A, Li S, et al. Retention of deposited ammonium and nitrate and its impact on the global forest carbon sink. Nature Communications, 2022, 13: 1-9 [33] Hu HW, He JZ. Comammox: A newly discovered nitrification process in the terrestrial nitrogen cycle. Journal of Soils and Sediments, 2017, 17: 2709-2717 [34] Shen JP, Zhang LM, Di HJ, et al. A review of ammonia-oxidizing bacteria and archaea in Chinese soils. Frontiers in Microbiology, 2012, 3: 296 [35] Simonin M, Le RouxX, Poly F, et al. Coupling between and among ammonia oxidizers and nitrite oxidizers in grassland mesocosms submitted to elevated CO2 and nitrogen supply. Microbial Ecology, 2015, 70: 809-818 [36] Chisholm C, Di HJ, Cameron K, et al. Soil moisture is a primary driver of comammox Nitrospira abundance in New Zealand soils. Science of the Total Environment, 2023, 858: 159961 [37] Ma WB, Jiang SJ, Assemien FEL, et al. Response of microbial functional groups involved in soil N cycle to N, P and NP fertilization in Tibetan alpine meadows. Soil Biology and Biochemistry, 2016, 101: 195-206 [38] Priemé A, Braker G, Tiedje JM. Diversity of nitrite reductase (nirK and nirS) gene fragments in forested upland and wetland soils. Applied and Environmental Microbiology, 2002, 68: 1893-1900 [39] Chen Z, Luo XQ, Hu RG, et al. Impact of long-term fertilization on the composition of denitrifier communities based on nitrite reductase analyses in a paddy soil. Microbial Ecology, 2010, 60: 850-861 [40] 冯蒙蒙, 林永新, 贺子洋, 等. 亚热带米槠天然林土壤氨氧化微生物对模拟氮沉降的响应. 应用生态学报, 2022, 33(6): 1622-1628 [41] Dong JF, Che RX, Jia SG, et al. Responses of ammonia-oxidizing archaea and bacteria to nitrogen and phosphorus amendments in an alpine steppe. European Journal of Soil Science, 2020, 71: 940-954 |
| [1] | LI Jiayu, SHI Xiuzhen, LI Shuaijun, WANG Zhenyu, WANG Jianqing, ZOU Bingzhang, WANG Sirong, HUANG Zhiqun. Effects of stand ages on soil enzyme activities in Chinese fir plantations and natural secondary forests [J]. Chinese Journal of Applied Ecology, 2024, 35(2): 339-346. |
| [2] | SUN Guanfa, LU Mei, SHAN Shengyang, ZHAO Dingrong, SUN Yujia, LIU Guoqing, ZHAO Xuyan, FENG Jun. Effect of short-term nitrogen deposition on dry-wet seasonal variation of soil respiration in degraded Poa pratensis alpine meadow of the Napahai, Yunnan, China [J]. Chinese Journal of Applied Ecology, 2024, 35(2): 390-398. |
| [3] | JI Yongkang, MA Nan, ZHANG Hui, LI Cuihuan, MA Yuandan, WU Qiqian, LI Yan. Effect of seasonal distribution in precipitation on soil nitrogen mineralization in a subtropical forest [J]. Chinese Journal of Applied Ecology, 2024, 35(1): 186-194. |
| [4] | CHANG Jie, JU Xin, YI Likai, NING Yanan, DIAO Huajie, HAO Jie, WANG Changhui, DONG Kuanhu. Characteristics of anion and cation in rhizosphere soil of saline grassland in North China under different nitrogen addition levels [J]. Chinese Journal of Applied Ecology, 2024, 35(1): 212-218. |
| [5] | WU Xinyang, SHAO Jing, CHEN Xiaoping, LI Jinlong, HU Dandan, ZHONG Quanlin, CHENG Dongliang. Nutrient content and resorption efficiency of leaves of broad-leaved trees along altitudes in Wuyi Mountains, China [J]. Chinese Journal of Applied Ecology, 2023, 34(9): 2305-2313. |
| [6] | KONG Dongyan, YANG Lingfang, DIAO Jingwen, GUO Peng. Meta-analysis on the effects of nitrogen deposition on soil N2O flux in different habitats [J]. Chinese Journal of Applied Ecology, 2023, 34(8): 2171-2177. |
| [7] | DAI Zecheng, LIU Yuexiu, DANG Ning, WANG Zhirui, CAI Jiangping, ZHANG Yuge, SONG Yongbo, LI Hui, JIANG Yong. Short-term legacy effects of long-term nitrogen and water addition on soil chemical properties and micro-bial characteristics in a temperate grassland [J]. Chinese Journal of Applied Ecology, 2023, 34(7): 1834-1844. |
| [8] | LI Aogui, CAI Shifeng, LUO Suzhen, WANG Xiaohong, CAO Lirong, WANG Xue, LIN Chengfang, CHEN Guangshui. C, N, and P stoichiometry for leaf litter of 62 woody species in a subtropical evergreen broadleaved forest [J]. Chinese Journal of Applied Ecology, 2023, 34(5): 1153-1160. |
| [9] | ZHANG Yuhui, CHEN Juan, XU Chao, XIONG Decheng, YANG Zhijie, CHEN Shidong, MAO Chao. Effects of warming on quantity and structure of litter-derived dissolved organic matter in subtropical natural Castanopsis kawakamii forests [J]. Chinese Journal of Applied Ecology, 2023, 34(4): 946-954. |
| [10] | MAO Chao, LIN Weisheng, XU Chao, LIU Xiaofei, XIONG Decheng, YANG Zhijie, CHEN Shidong. Soil warming decreased dissolved organic carbon quantity and quality in subtropical forests. [J]. Chinese Journal of Applied Ecology, 2023, 34(3): 623-630. |
| [11] | SHI Jia-mian, SONG Ge, LIU Shanshan, ZHENG Yong. Responses of arbuscular mycorrhizal fungal morphological traits and the diversity of spore-associated bacteria to simulated nitrogen deposition and drought in a Cunninghamia lanceolata plantation soil [J]. Chinese Journal of Applied Ecology, 2023, 34(12): 3291-3300. |
| [12] | WANG Yihuan, JIN Yidan, JIANG Mingkai, MA Shuqin, CHEN Youchao, CAI Yanjiang. Short-term nitrogen deposition changes chemical composition of litter and soil organic matter in a Moso bamboo forest [J]. Chinese Journal of Applied Ecology, 2023, 34(10): 2593-2600. |
| [13] | SONG Ge, LI Xiao-jie, WANG Quan-cheng, LYU Mao-kui, XIE Jin-sheng, HE Ji-zheng, ZHENG Yong. Responses of soil microbial biomass and carbon source utilization to simulated nitrogen deposition and drought in a Cunninghamia lanceolata plantation [J]. Chinese Journal of Applied Ecology, 2022, 33(9): 2388-2396. |
| [14] | FENG Meng-meng, LIN Yong-xin, HE Zi-yang, LIU Xiao-fei, CHEN Shi-dong, WAN Song, DUAN Chun-jian, YE Gui-ping, HE Ji-zheng. Responses of soil ammonia-oxidizing microorganisms to simulated nitrogen deposition in a natural Castanopsis carlesii forest [J]. Chinese Journal of Applied Ecology, 2022, 33(6): 1622-1628. |
| [15] | XIA Yun, SHI Jia-qi, XIAO Hua-cui, WANG Quan-cheng, YANG Liu-ming, FAN Yue-xin. Optimization for the determination of phenol oxidase activity in subtropical forest soils developed on sandstone [J]. Chinese Journal of Applied Ecology, 2022, 33(5): 1223-1232. |
| Viewed | ||||||
|
Full text |
|
|||||
|
Abstract |
|
|||||