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应用生态学报 ›› 2012, Vol. 23 ›› Issue (11): 2983-2990.

• 研究报告 • 上一篇    下一篇

秦岭秀雅杜鹃野生种群遗传多样性和遗传分化的AFLP分析

赵冰**,徐曼,司国臣,李厚华,张延龙   

  1. (西北农林科技大学林学院, 陕西杨凌 712100)
  • 出版日期:2012-11-18 发布日期:2012-11-18

Genetic diversity and genetic differentiation of Rhododendron concinnum wild populations in Qinling Mountains of Northwest China: An AFLP analysis.

ZHAO Bing, XU Man, SI Guo-chen, LI Hou-hua, ZHANG Yan-long   

  1. (College of Forestry, Northwest A & F University, Yangling 712100, Shaanxi, China)
  • Online:2012-11-18 Published:2012-11-18

摘要: 利用AFLP分子标记技术,对秦岭地区7个秀雅杜鹃野生种群的遗传多样性和遗传分化进行研究.结果表明: M52E41、M62E46和M64E94等3个引物组合共扩增出182条DNA片段,其中151条是多态的,多态位点比率为83.1%.7个秀雅杜鹃种群所检测的多态位点百分率(PPL)、Nei的基因多样性指数(h)和Shannon信息指数(I)的变化趋势一致,其排序为眉县种群>柞水种群>镇安种群>户县种群>宁强种群>南郑种群>周至种群.POPGENE分析表明,秀雅杜鹃在物种水平(PPL=91.22%,I=0.7217,h=0.5095)和种群水平(PPL=77.56%,I=0.6409,h=0.4725)都具有较高的遗传多样性.种群间的遗传分化系数(Gst)为7.26%,说明有92.74%的变异存在于种群内部.AMOVA分析表明,在总的遗传变异中,85.3%的变异发生在种群内,14.7%的变异发生在种群间,说明秀雅杜鹃种群的遗传变异主要存在于种群内部.UPGMA聚类分析表明,种群间的遗传距离与种群间的地理距离没有明显的相关性.最后提出了秦岭地区秀雅杜鹃种质资源的保护策略.

Abstract: By using amplified fragment length polymorphism (AFLP) technique, an investigation was made on the genetic diversity and genetic differentiation of seven wild populations of Rhododendron concinnum in Qinling Mountains of Northwest China.A total of 182 amplification products were generated from three AFLP selective primer combinations, of which, 151 were polymorphic.The percentage of polymorphism was 83.1%. The change trends showed by the percentage of polymorphic loci (PPL), Nei’s gene diversity (h), and Shannon’s information index (I) were uniform, and the order of the populations was Meixian > Zhashui > Zhen’an > Huxian > Ningqiang > Nanzheng > Zhouzhi. The POPGENE analysis showed that the R.concinnum had higher genetic diversity at both species level (PPL=91.22%,I=0.7217,h=0.5095) and population level (PPL=77.56%,I=0.6409,h=0.4725). The coefficient of gene differentiation among the populations (Gst) was 0.0726, indicating that 92.74% of genetic variation occurred within the populations. The analysis of molecular variance (AMOVA) showed that 85.3% of the genetic variation was within the populations, and 14.7% of it was among the populations. The unweighted pair group method with rithmeticmean (UPGMA) indicated that there was no significant correlation between the genetic distance and the geographic distance among the R. concinnum populations. The conservation strategies for R. concinnum germplasm resources were put forward.