[1] Mao C (毛 超), Qi L-H (漆良华). Research advances on nitrogen transformation and cycling in forest soil. World Forest Research (世界林业研究), 2015, 28(2): 8-13 (in Chinese)
[2] Gou X-L (苟小林). Effects of Simulated Climate Warming on Soil Carbon and Nitrogen Transformation in the Alpine Forest of Western Sichuan. Master Thesis. Ya’an: Sichuan Agricultural University, 2014 (in Chinese)
[3] Llad S, L pez-Mondéjar R, Baldrian P. Forest soil bacteria: Diversity, involvement in ecosystem processes, and response to global change. Microbiology and Molecular Biology Reviews, 2017, 81: e00063-16, doi:10.1128/mmbr.00063-16
[4] Kamimura N, Takahashi K, Mori K, et al. Bacterial catabolism of lignin-derived aromatics: New findings in a recent decade: Update on bacterial lignin catabolism. Environmental Microbiology Reports, 2017, 9: 679-705
[5] Bani A, Pioli S, Ventura M, et al. The role of microbial community in the decomposition of leaf litter and deadwood. Applied Soil Ecology, 2018, 126: 75-84
[6] He J-Z (贺纪正), Zhang L-M (张丽梅). Key processes and microbial mechanisms of soil nitrogen transformation. Microbiology China (微生物学通报), 2013, 40(1): 98-108 (in Chinese)
[7] Zhao S-H (赵少华), Yu W-T (宇万太), Zhang L (张 璐), et al. Research advance in soil organic phosphorus. Chinese Journal of Applied Ecology (应用生态学报), 2004, 15 (11): 2189-2194 (in Chinese)
[8] Zhang B-G (张宝贵), Li G-T (李贵桐). Roles of soil organisms on the enhancement of plant availability of soil phosphorus. Acta Pedologica Sinica (土壤学报), 1998, 35 (1): 104-111 (in Chinese)
[9] Liu X-Z (刘新展), He J-Z (贺纪正), Zhang L-M (张丽梅). The sulfate reducing bacteria and surfer cycle in paddy soil. Acta Ecologica Sinica (生态学报), 2009, 29(8): 4455-4463 (in Chinese)
[10] Gobat JM, Aragno M, Matthey W. The Living Soil: Fundamentals of Soil Science and Soil Biology. Plymouth, UK: Science Publishers Press, 2004
[11] Schmidt SK, Nemergut DR, Darcy JL, et al. Do bacte-rial and fungal communities assemble differently during primary succession? Molecular Ecology, 2014, 23: 254-258
[12] Yarwood SA, H gberg MN. Soil bacteria and archaea change rapidly in the first century of Fennoscandian boreal forest development. Soil Biology and Biochemistry, 2017, 114: 160-167
[13] Banning NC, Gleeson DB, Grigg AH, et al. Soil microbial community successional patterns during forest ecosystem restoration. Applied and Environmental Microbio-logy, 2011, 77: 6158-6164
[14] Zeng Q, An S, Liu Y. Soil bacterial community response to vegetation succession after fencing in the grassland of China. Science of the Total Environment, 2017, 609: 2-10
[15] Fierer N, Jackson RB. The diversity and biogeography of soil bacterial communities. Proceedings of the National Academy of Sciences of the United States of America, 2006, 103: 626-631
[16] Fierer N, Strickland MS, Liptzin D, et al. Global patterns in belowground communities. Ecology Letters, 2009, 12: 1238-1249
[17] Rousk J, B th E, Brookes PC, et al. Soil bacterial and fungal communities across a pH gradient in an arable soil. The ISME Journal, 2010, 4: 1340-1351
[18] Brockett BFT, Prescott CE, Graystonet SJ. Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada. Soil Biology and Biochemistry, 2012, 44: 9-20
[19] Landesman WJ, Nelson DM, Fitzpatrick MC. Soil pro-perties and tree species drive β-diversity of soil bacterial communities. Soil Biology and Biochemistry, 2014, 76: 201-209
[20] Sun H (孙 海), Wang Q-X (王秋霞), Zhang C-G (张春阁), et al. Effects of different leaf litters on the physicochemical properties and soil microbial communities in Panax ginseng-growing soil. Acta Ecologica Sinica (生态学报), 2018, 38(10): 1-13 (in Chinese)
[21] Baldrian P, Kolarˇík M, tursov M, et al. Active and total microbial communities in forest soil are largely different and highly stratified during decomposition. The ISME Journal, 2012, 6: 248-258
[22] Lin YT, Jangid K, Whitman WB, et al. Soil bacterial communities in native and regenerated perhumid montane forests. Applied Soil Ecology, 2011, 47: 111-118
[23] Van Elsas JD, Boersma FGH, et al. A review of mole-cular methods to study the microbiota of soil and the mycosphere. European Journal of Soil Biology, 2011, 47: 77-87
[24] Asshauer KP, Wemheuer B, Daniel R, et al. Tax4Fun: Predicting functional profiles from metagenomic 16S rRNA data. Bioinformatics, 2015, 31: 2882-2884
[25] Wemheuer F, Kaiser K, Karlovsky P, et al. Bacterial endophyte communities of three agricultural important grass species differ in their response towards management regimes. Scientific Reports, 2017, 7: 1-11
[26] Herzog S, Wemheuer F, Wemheuer B, et al. Effects of fertilization and sampling time on composition and diversity of entire and active bacterial communities in german grassland soils. PLoS One, 2015, 10(12): e0145575, doi:10.1371/journal.pone.0145575
[27] Kaiser K, Wemheuer B, Korolkow V, et al. Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests. Scientific Reports, 2016, 6: 1-10
[28] Yang K (杨 琨), Khan MA. Not disturbed old-growth forest. Forest & Humankind (森林与人类), 2015(9): 194-199 (in Chinese)
[29] Tamaki H, Wright CL, Li X, et al. Analysis of 16S rRNA amplicon sequencing options on the Roche/454 next-generation titanium sequencing platform. PLoS One, 2011, 6(9): e25263, doi:10.1371/journal.pone.0025263
[30] Edgar RC. UPARSE: Highly accurate OTU sequences from microbial amplicon reads. Nature Methods, 2013, 10: 996-998
[31] Ferrier S, Manion G, Elith J, et al. Using generalized dissimilarity modelling to analyse and predict patterns of beta diversity in regional biodiversity assessment. Diversity and Distributions, 2007, 13: 252-264
[32] Shen JP, Cao P, Hu HW, et al. Differential response of archaeal groups to land use change in an acidic red soil. Science of the Total Environment, 2013, 461: 742-749
[33] Landesman WJ, Nelson DM, Fitzpatrick MC. Soil pro-perties and tree species drive β-diversity of soil bacterial communities. Soil Biology and Biochemistry, 2014, 76: 201-209
[34] Ashcroft MB, Gollan JR, Faith DP, et al. Using gene-ralised dissimilarity models and many small samples to improve the efficiency of regional and landscape scale invertebrate sampling. Ecological Informatics, 2010, 5: 124-132
[35] Myers MR, King GM. Isolation and characterization of Acidobacterium ailaaui sp. nov., a novel member of Acidobacteria subdivision 1, from a geothermally heated Hawaiian microbial mat. International Journal of Syste-matic and Evolutionary Microbiology, 2016, 66: 5328-5335
[36] Pankratov TA, Dedysh SN. Granulicella paludicola gen. nov., sp. nov., Granulicella pectinivorans sp. nov., Granulicella aggregans sp. nov. and Granulicella rosea sp. nov., acidophilic, polymer-degrading acidobacteria from Sphagnum peat bogs. International Journal of Systematic and Evolutionary Microbiology, 2010, 60: 2951-2959
[37] Husson. Redox potential (Eh) and pH as drivers of soil/plant/microorganism systems: A transdisciplinary overview pointing to integrative opportunities for agro-nomy. Plant and Soil, 2013, 362: 389-417
[38] Wang X, Li H, Bezemer TM, et al. Drivers of bacterial beta diversity in two temperate forests. Ecological Research, 2016, 31: 57-64
[39] Shen C, Xiong J, Zhang H, et al. Soil pH drives the spatial distribution of bacterial communities along elevation on Changbai Mountain. Soil Biology and Biochemistry, 2013, 57: 204-211
[40] Erguder TH, Boon N, Wittebolle L, et al. Environmental factors shaping the ecological niches of ammonia-oxidizing archaea. FEMS Microbiology Reviews, 2009, 33: 855-869
[41] Sims A, Horton J, Gajaraj S, et al. Temporal and spatial distributions of ammonia-oxidizing archaea and bacteria and their ratio as an indicator of oligotrophic conditions in natural wetlands. Water Research, 2012, 46: 4121-4129
[42] Santoro AE, Francis CA, De Sieyes NR, et al. Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary. Environmental Microbiology, 2008, 10: 1068-1079
[43] Xie C-X (谢长校), Sun J-Z (孙建中), Li C-L (李成林), et al. Exploring the lignin degradation by bacteria. Microbiology China (微生物学通报), 2015, 42(6): 1122-1132 (in Chinese)
[44] Liu G-F (刘国凡), Deng T-X (邓廷秀). A regression model of influence of soil condition on locust nitrogen fixation. Acta Pedologica Sinica (土壤学报), 1991, 28(4): 439-446 (in Chinese)
[45] He D-H (何冬华), Shen Q-L (沈秋兰), Xu Q-F (徐秋芳), et al. Evolvement of structure and abundance of soil nitrogen-fixing bacterial community in phyllostachys edulis plantations with age of time. Acta Pedologica Sinica (土壤学报), 2015, 52(4): 934-942 (in Chinese)
[46] Reed SC, Cleveland CC, Townsend AR. Relationships among phosphorus, molybdenum and free-living nitrogen fixation in tropical rain forests: Results from observational and experimental analyses. Biogeochemistry, 2013, 114: 135-147
[47] Zheng Y-P (郑亚萍), Zheng Y-M (郑永美), Sun K-X (孙奎香). Advanced on the effect of different nut-rient elements on symbiotic nitrogen fixation potential. Chinese Agricultural Science Bulletin (中国农学通报), 2011, 27(5): 49-52 (in Chinese)
[48] Stark JM, Firestone MK. Mechanisms for soil moisture effects on activity of nitrifying bacteria. Applied and Environmental Microbiology, 1995, 61: 218-221
[49] Ingwersen J, Butterbach-Bahl K, Gasche R, et al. Barometric process separation: New method for quantifying nitrification, denitrification, and nitrous oxide sources in soils. Soil Science Society of America Journal, 1999, 63: 117-128
[50] Schink B, Friedrich M. Phosphite oxidation by sulphate reduction. Nature, 2000, 406: 37
[51] Gao A-G (高爱国), Chen H-W (陈皓文), Sun H-Q (孙海青). Analysis on correlation between sulphate-reducing bacteria and bio-geochemical factors of sediment in the Chukchi sea and Bering sea, Arctic. Acta Scientiae Circumstantiae (环境科学学报), 2003, 23(5): 619-624 (in Chinese)
[52] Yuan H, Ge T, Wu X, et al. Long-term field fertilization alters the diversity of autotrophic bacteria based on the ribulose-1,5-biphosphate carboxylase/oxygenase (RubisCO) large-subunit genes in paddy soil. Applied Microbiology and Biotechnology, 2012, 95: 1061-1071
[53] Sardans J, Pe uelas J, Estiarte M. Warming and drought alter soil phosphatase activity and soil P availability in a Mediterranean shrubland. Plant and Soil, 2006, 289: 227-238 |